gatk3的最后一个经典版本3.8

Go to file

Ryan Poplin 7d11b4d5f1 Balancing training classes between SNP/Indel and TP/FP. -- This results in much more consistent distribution of LOD scores for SNPs and Indels. -- Removing genotype summary stats since they are now produced by default. -- Added functionality to specify certain subsets of the training data to be used in Tranche file generation, -good:tranche=true set.vcf		2014-04-07 15:23:53 -04:00
licensing	deleted old license files	2013-07-02 16:36:47 -04:00
protected	Adding GenotypeSummaries as INFO field annotations.	2014-04-06 11:50:10 -04:00
public	Balancing training classes between SNP/Indel and TP/FP.	2014-04-07 15:23:53 -04:00
settings/helpTemplates	Replaced local drmaa and Jama artifacts with versions from maven central.	2014-02-22 01:21:35 +08:00
.gitignore	Fixed bug using GraphBased due to infinite likelihoods resulting from the calculation of alignment cost of very long insertion or deletions (done in linear scale)	2014-04-01 16:14:52 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
ant-bridge.sh	Rename existing PipelineTests to QueueTests to prepare for upcoming push of new pipeline tests	2014-03-10 21:24:03 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
pom.xml	Update pom versions to mark the start of GATK 3.2 development	2014-03-18 01:18:59 -04:00

README.md

The Genome Analysis Toolkit

See http://www.broadinstitute.org/gatk/