97 lines
2.7 KiB
C
97 lines
2.7 KiB
C
/*Copyright (c) 2012 The Broad Institute
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*Permission is hereby granted, free of charge, to any person
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*obtaining a copy of this software and associated documentation
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*files (the "Software"), to deal in the Software without
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*restriction, including without limitation the rights to use,
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*copy, modify, merge, publish, distribute, sublicense, and/or sell
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*copies of the Software, and to permit persons to whom the
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*Software is furnished to do so, subject to the following
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*conditions:
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*The above copyright notice and this permission notice shall be
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*included in all copies or substantial portions of the Software.
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*THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
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*EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES
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*OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
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*NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT
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*HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
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*WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
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*FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR
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*THE USE OR OTHER DEALINGS IN THE SOFTWARE.
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*/
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/* DO NOT EDIT THIS FILE - it is machine generated */
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#include <jni.h>
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/* Header for class Sandbox */
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#ifndef _Included_Sandbox
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#define _Included_Sandbox
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#ifdef __cplusplus
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extern "C" {
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#endif
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#undef Sandbox_enableAll
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#define Sandbox_enableAll -1LL
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/*
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* Class: Sandbox
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* Method: jniGetMachineType
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* Signature: ()J
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*/
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JNIEXPORT jlong JNICALL Java_Sandbox_jniGetMachineType
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(JNIEnv *, jobject);
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/*
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* Class: Sandbox
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* Method: jniInitializeClassFieldsAndMachineMask
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* Signature: (Ljava/lang/Class;Ljava/lang/Class;J)V
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*/
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JNIEXPORT void JNICALL Java_Sandbox_jniInitializeClassFieldsAndMachineMask
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(JNIEnv *, jobject, jclass, jclass, jlong);
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/*
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* Class: Sandbox
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* Method: jniInitializeHaplotypes
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* Signature: (I[LSandbox/JNIHaplotypeDataHolderClass;)V
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*/
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JNIEXPORT void JNICALL Java_Sandbox_jniInitializeHaplotypes
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(JNIEnv *, jobject, jint, jobjectArray);
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/*
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* Class: Sandbox
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* Method: jniFinalizeRegion
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* Signature: ()V
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*/
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JNIEXPORT void JNICALL Java_Sandbox_jniFinalizeRegion
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(JNIEnv *, jobject);
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/*
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* Class: Sandbox
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* Method: jniComputeLikelihoods
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* Signature: (II[LSandbox/JNIReadDataHolderClass;[LSandbox/JNIHaplotypeDataHolderClass;[DI)V
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*/
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JNIEXPORT void JNICALL Java_Sandbox_jniComputeLikelihoods
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(JNIEnv *, jobject, jint, jint, jobjectArray, jobjectArray, jdoubleArray, jint);
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/*
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* Class: Sandbox
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* Method: jniClose
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* Signature: ()V
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*/
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JNIEXPORT void JNICALL Java_Sandbox_jniClose
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(JNIEnv *, jobject);
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/*
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* Class: Sandbox
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* Method: doEverythingNative
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* Signature: ([B)V
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*/
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JNIEXPORT void JNICALL Java_Sandbox_doEverythingNative
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(JNIEnv *, jobject, jstring);
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#ifdef __cplusplus
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}
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#endif
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#endif
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