gatk-3.8/public
Karthik Gururaj 7cd23543a1 Added public license text to all C++ files 2014-03-03 09:04:00 -08:00
..
VectorPairHMM Added public license text to all C++ files 2014-03-03 09:04:00 -08:00
c At chartl's request, add the bwa aln -N and bwa aln -m parameters to the bindings. 2012-01-17 14:47:53 -05:00
chainFiles
doc Fixed issues raised by Appistry QA (mostly small fixes, corrections & clarifications to GATKDocs) 2013-03-12 10:57:14 -04:00
external-example Fixed mvn run for packagetests over external-example. 2014-02-22 01:21:34 +08:00
gatk-framework Merge branch 'master' of github.com:broadinstitute/gsa-unstable 2014-02-25 20:56:28 -08:00
gatk-package Fixed scope for test-jar depedencies. 2014-02-22 01:21:34 +08:00
gatk-queue-extgen Bumped version to 2.8-SNAPSHOT, using new update_pom_versions.sh script. 2014-02-03 13:50:46 -05:00
gsalib Added a set of serial tests to gatk/queue packages, which runs all tests under their package in one TestNG execution. 2014-02-06 08:25:38 -05:00
java/config Moved files to maven directories. 2014-02-03 13:50:44 -05:00
package-tests Exclude all transitive dependencies in maven package-tests 2014-02-12 14:59:05 -05:00
perl Fixing the liftover script to not require strict VCF header validation. 2013-11-07 09:02:17 -05:00
queue-framework Added tests for cleaning up scattered .bai files, and using the log directory. 2014-02-26 02:11:28 +08:00
queue-package Fixed scope for test-jar depedencies. 2014-02-22 01:21:34 +08:00
repo Replaced local drmaa and Jama artifacts with versions from maven central. 2014-02-22 01:21:35 +08:00
sting-root Followed Khalid's suggestion for packing libVectorLoglessCaching into 2014-02-26 11:47:42 -08:00
sting-utils 1. Changed logger.info to logger.warn in PairHMMLikelihoodCalculationEngine.java 2014-02-28 16:08:28 -08:00
pom.xml Adding the external example to the build. 2014-02-15 01:26:07 +08:00