| .. |
|
VectorPairHMM
|
Added public license text to all C++ files
|
2014-03-03 09:04:00 -08:00 |
|
c
|
At chartl's request, add the bwa aln -N and bwa aln -m parameters to the bindings.
|
2012-01-17 14:47:53 -05:00 |
|
chainFiles
|
…
|
|
|
doc
|
Fixed issues raised by Appistry QA (mostly small fixes, corrections & clarifications to GATKDocs)
|
2013-03-12 10:57:14 -04:00 |
|
external-example
|
Fixed mvn run for packagetests over external-example.
|
2014-02-22 01:21:34 +08:00 |
|
gatk-framework
|
Merge branch 'master' of github.com:broadinstitute/gsa-unstable
|
2014-02-25 20:56:28 -08:00 |
|
gatk-package
|
Fixed scope for test-jar depedencies.
|
2014-02-22 01:21:34 +08:00 |
|
gatk-queue-extgen
|
Bumped version to 2.8-SNAPSHOT, using new update_pom_versions.sh script.
|
2014-02-03 13:50:46 -05:00 |
|
gsalib
|
Added a set of serial tests to gatk/queue packages, which runs all tests under their package in one TestNG execution.
|
2014-02-06 08:25:38 -05:00 |
|
java/config
|
Moved files to maven directories.
|
2014-02-03 13:50:44 -05:00 |
|
package-tests
|
Exclude all transitive dependencies in maven package-tests
|
2014-02-12 14:59:05 -05:00 |
|
perl
|
Fixing the liftover script to not require strict VCF header validation.
|
2013-11-07 09:02:17 -05:00 |
|
queue-framework
|
Added tests for cleaning up scattered .bai files, and using the log directory.
|
2014-02-26 02:11:28 +08:00 |
|
queue-package
|
Fixed scope for test-jar depedencies.
|
2014-02-22 01:21:34 +08:00 |
|
repo
|
Replaced local drmaa and Jama artifacts with versions from maven central.
|
2014-02-22 01:21:35 +08:00 |
|
sting-root
|
Followed Khalid's suggestion for packing libVectorLoglessCaching into
|
2014-02-26 11:47:42 -08:00 |
|
sting-utils
|
1. Changed logger.info to logger.warn in PairHMMLikelihoodCalculationEngine.java
|
2014-02-28 16:08:28 -08:00 |
|
pom.xml
|
Adding the external example to the build.
|
2014-02-15 01:26:07 +08:00 |