gatk3的最后一个经典版本3.8

Eric Banks 7c89fe01b3 Instead of having the padded reference base be some hackish attribute it is now an actual variable in the Variant Context class. More importantly, we now always require that it be present when padding is necessary - and validate as such upon construction of the VC. This cleans up the interface significantly because we no longer require that a reference base be passed in when writing a VC/VCF record.		2011-08-03 11:00:36 -04:00
public	Instead of having the padded reference base be some hackish attribute it is now an actual variable in the Variant Context class. More importantly, we now always require that it be present when padding is necessary - and validate as such upon construction of the VC. This cleans up the interface significantly because we no longer require that a reference base be passed in when writing a VC/VCF record.	2011-08-03 11:00:36 -04:00
settings	Updates to the help layout.	2011-07-26 19:29:25 -04:00
LICENSE	One last test...	2011-06-28 19:18:17 -04:00
build.xml	Merged bug fix from Stable into Unstable	2011-07-27 12:37:34 -04:00
ivy.xml	Runs and emits an HTML document	2011-07-20 17:16:33 -04:00