gatk-3.8/public/java
Mark DePristo 7c5c656b46 Uncovered fundamental accounting bug in VariantEval. Will be fixed by dev. team
Problem is that Novelty sees multiple records at a site (SNP, INDEL) to calculate whether a site is novel, but VariantEvalWalker makes an arbitrary decision which to use for analysis and CompOverlap may not see a comp record of the same type as eval.  So you get lines where the stratification is known but there are 10 novel sites!
2011-07-28 14:19:27 -04:00
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config Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
src Uncovered fundamental accounting bug in VariantEval. Will be fixed by dev. team 2011-07-28 14:19:27 -04:00
test Uncovered fundamental accounting bug in VariantEval. Will be fixed by dev. team 2011-07-28 14:19:27 -04:00