Mark DePristo ed0b1c5aba Fix bug in ReadThreadingAssembler in cycle failures causing NPE		2013-07-02 15:46:48 -04:00
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src/org/broadinstitute/sting	Fix bug in ReadThreadingAssembler in cycle failures causing NPE	2013-07-02 15:46:48 -04:00
test/org/broadinstitute/sting	Working version of HaplotypeCaller ReferenceConfidenceModel that accounts for indels as well as SNP confidences	2013-07-02 15:46:38 -04:00