Mark DePristo 810e2da1d4 Cleanup and unit tests for EventType and ReadRecalibrationInfo in BQSR ... -- Added unit tests for EventType and ReadRecalibrationInfo -- Simplified interface of EventType. Previously this enum carried an index with it, but this is redundant with the enum.ordinal function. Now just using that function instead.		2013-01-04 11:39:25 -05:00
..
ContextCovariateUnitTest.java	Cleanup BQSR classes	2012-07-31 08:11:03 -04:00
CycleCovariateUnitTest.java	The user can now set the maximum allowable cycle on the command-line with --maximum_cycle_value. This value is (now) enforced in the Cycle covariate and a User Error is thrown if the maximum value is passed (with a helpful error message). Added unit tests to cover this new functionality.	2012-11-20 22:41:57 -05:00
EventTypeUnitTest.java	Cleanup and unit tests for EventType and ReadRecalibrationInfo in BQSR	2013-01-04 11:39:25 -05:00
QualQuantizerUnitTest.java	Ready for full-scale evaluation adaptive BQSR contexts	2012-08-03 16:02:53 -04:00
ReadCovariatesUnitTest.java	Cleanup BQSR classes	2012-07-31 08:11:03 -04:00
ReadGroupCovariateUnitTest.java	Cleanup BQSR classes	2012-07-31 08:11:03 -04:00
RecalDatumUnitTest.java	Minor cleanup and expansion of the RecalDatum unit tests	2012-12-24 13:35:58 -05:00
RecalUtilsUnitTest.java	BQSR optimization: read group x quality score calibration table is thread-local	2012-12-24 13:35:58 -05:00
RecalibrationReportUnitTest.java	Cleanup and unit tests for EventType and ReadRecalibrationInfo in BQSR	2013-01-04 11:39:25 -05:00
RecalibrationTablesUnitTest.java	BQSR optimization: read group x quality score calibration table is thread-local	2012-12-24 13:35:58 -05:00
RecalibrationTestUtils.java	BQSR optimization: read group x quality score calibration table is thread-local	2012-12-24 13:35:58 -05:00