hanna 7aa7a5f9b8 Bug fixes for edge cases and filtration in the earlier performance fixes. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2989 348d0f76-0448-11de-a6fe-93d51630548a		2010-03-12 04:46:08 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src	Bug fixes for edge cases and filtration in the earlier performance fixes.	2010-03-12 04:46:08 +00:00
test/org/broadinstitute/sting	adding methods to get RODs by name or type in read traversals, performance improvements to RODs for Reads in general, and some more Tribble infrastructure.	2010-03-11 21:13:39 +00:00