gatk-3.8/public/scala/src/org/broadinstitute/sting/queue/util
Khalid Shakir b80d407dc7 No more hunting down R "resources". As a tradeoff Rscript cannot be specified on the commandline and will be found in the environment path.
Other minor cleanup.
2011-10-27 14:17:07 -04:00
..
CollectionUtils.scala Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
EmailMessage.scala Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
EmailSettings.scala Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
Logging.scala Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
PrimitiveOptionConversions.scala Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
QJobReport.scala No more hunting down R "resources". As a tradeoff Rscript cannot be specified on the commandline and will be found in the environment path. 2011-10-27 14:17:07 -04:00
QScriptUtils.scala Default jobreport is now jobPrefix, so you see logs like Q-2508.jobreport.txt 2011-08-28 19:19:45 -04:00
ReflectionUtils.scala Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
Retry.scala Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
RetryException.scala Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
ScalaCompoundArgumentTypeDescriptor.scala Updated to reflect new parse() function 2011-07-30 15:34:20 -04:00
StringFileConversions.scala Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
SystemUtils.scala Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
TextFormatUtils.scala Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
VCF_BAM_utilities.scala Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00