rpoplin 79c4cc1db7 AnalyzeAnnotations now breaks out titv by calls in hapmap and also plots true positive rates. Any RODs passed in whose name starts with 'truth' is considered to be the truth set. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2726 348d0f76-0448-11de-a6fe-93d51630548a		2010-01-28 21:41:23 +00:00
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alignment	Misc bug fixes.	2010-01-05 14:48:19 +00:00
analyzecovariates	Initial checkin of skeleton code for AnalyzeAnnotations	2010-01-15 21:52:34 +00:00
gatk	AnalyzeAnnotations now breaks out titv by calls in hapmap and also plots true positive rates. Any RODs passed in whose name starts with 'truth' is considered to be the truth set.	2010-01-28 21:41:23 +00:00
oneoffprojects	Lots of changes; all to do something relatively minor.	2010-01-28 21:06:56 +00:00
playground	AnalyzeAnnotations now breaks out titv by calls in hapmap and also plots true positive rates. Any RODs passed in whose name starts with 'truth' is considered to be the truth set.	2010-01-28 21:41:23 +00:00
utils	Much clearer (and, like, not totally incorrect) implementation of isNovel	2010-01-28 21:16:21 +00:00