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AlignmentUtils.java
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Making a copy here before changing the live copy
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2010-01-27 20:44:15 +00:00 |
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ConsensusSequence.java
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Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive.
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2009-12-01 05:29:00 +00:00 |
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CountedObject.java
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back to archive
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2009-12-29 22:00:38 +00:00 |
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CountedObjectComparatorAdapter.java
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More archiving (with permission from Andrey) plus a move to core.
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2009-12-03 15:40:27 +00:00 |
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DiscardingPileReceiver.java
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Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive.
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2009-12-01 05:29:00 +00:00 |
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DiscardingReceiver.java
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Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive.
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2009-12-01 05:29:00 +00:00 |
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Indel.java
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Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive.
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2009-12-01 05:29:00 +00:00 |
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IndelGenotyperWalker.java
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Removing deprecated version of indel genotyper (putting it in archive in case we need to reproduce original 1KG indel calls for some reason).
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2010-01-31 14:05:36 +00:00 |
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IndelInspectorMain.java
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Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive.
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2009-12-01 05:29:00 +00:00 |
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IndelRecordPileCollector.java
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Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive.
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2009-12-01 05:29:00 +00:00 |
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IndexedSequence.java
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Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive.
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2009-12-01 05:29:00 +00:00 |
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Interval.java
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More archiving (with permission from Andrey) plus a move to core.
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2009-12-03 15:40:27 +00:00 |
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IntervalComparator.java
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Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive.
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2009-12-01 05:29:00 +00:00 |
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KmerCodeIterator.java
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Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive.
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2009-12-01 05:29:00 +00:00 |
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MSAColumn.java
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Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive.
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2009-12-01 05:29:00 +00:00 |
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Matrix.java
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Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive.
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2009-12-01 05:29:00 +00:00 |
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MultipleAlignment.java
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Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive.
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2009-12-01 05:29:00 +00:00 |
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PairwiseAlignment.java
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Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive.
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2009-12-01 05:29:00 +00:00 |
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PassThroughWriter.java
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Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive.
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2009-12-01 05:29:00 +00:00 |
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PileBuilder.java
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Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive.
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2009-12-01 05:29:00 +00:00 |
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RecordPileReceiver.java
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Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive.
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2009-12-01 05:29:00 +00:00 |
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RecordReceiver.java
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Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive.
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2009-12-01 05:29:00 +00:00 |
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SequencePile.java
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Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive.
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2009-12-01 05:29:00 +00:00 |
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ShowMSA.java
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Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive.
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2009-12-01 05:29:00 +00:00 |
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SimpleInterval.java
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More archiving (with permission from Andrey) plus a move to core.
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2009-12-03 15:40:27 +00:00 |
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StrictlyUpperTriangularMatrix.java
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Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive.
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2009-12-01 05:29:00 +00:00 |
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SymmetricMatrix.java
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Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive.
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2009-12-01 05:29:00 +00:00 |
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