gatk-3.8/public
Christopher Hartl 798596257b Enable the Genotype Phasing Evaluator. Because it didn't have the same argument structure as the base class, update2 of VariantEvaluator was being called, rather than update2 of the actual module. 2012-01-23 10:50:16 -05:00
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R queueJobReport now compresses PDF when running R 2.13+. 2012-01-10 17:32:30 -05:00
c At chartl's request, add the bwa aln -N and bwa aln -m parameters to the bindings. 2012-01-17 14:47:53 -05:00
chainFiles
doc
java Enable the Genotype Phasing Evaluator. Because it didn't have the same argument structure as the base class, update2 of VariantEvaluator was being called, rather than update2 of the actual module. 2012-01-23 10:50:16 -05:00
packages Revved Picard to incorporate tfennell's AsyncSAMFileWriter. 2011-12-06 10:37:42 -05:00
perl Update to the bindings for liftOverVCF.pl (to -V from -B) 2011-09-15 15:33:09 -04:00
scala Fix edge case for very small VCFs 2012-01-19 00:51:28 -05:00
testdata Data Processing Pipeline Test 2011-12-12 00:24:51 -05:00