zzh
/
gatk-3.8
1
0
Fork 0
Code Issues Pull Requests Packages Projects Releases Wiki Activity
gatk3的最后一个经典版本3.8
8,422 Commits
1 Branch
0 Tags
257 MiB
Java 95.8%
Scala 3.8%
R 0.2%
JavaScript 0.1%
 
 
 
 
Go to file
Mauricio Carneiro 78d9bf7196 Added REVERT_SOFTCLIPPED_BASES capability to ReadClipper 
* New ClippingOp REVERT_SOFTCLIPPED_BASES turns soft clipped bases into matches.
    * Added functionality to clipping op to revert all soft clip bases in a read into matches
    * Added revertSoftClipBases function to the ReadClipper for public use
    * Wrote systematic unit tests
 		2011-12-20 00:04:30 -05:00
public Added REVERT_SOFTCLIPPED_BASES capability to ReadClipper 2011-12-20 00:04:30 -05:00
settings Revved Picard to incorporate tfennell's AsyncSAMFileWriter. 2011-12-06 10:37:42 -05:00
.gitignore Minor additions to the shared .gitignore file, now that Mark has checked one in. 2011-10-26 12:24:28 -04:00
LICENSE One last test... 2011-06-28 19:18:17 -04:00
build.xml Extensive unit test for GenotypeContextUnitTest 2011-11-20 18:28:01 -05:00
ivy.xml Updating the HybridSelectionPipeline for SnpEff 2.0.4 RC3 2011-11-17 14:46:12 -05:00