gatk3的最后一个经典版本3.8

Eric Banks 78721ee09b Added new walker to split MNPs into their allelic primitives (SNPs). ... * Can be extended to complex alleles at some point. * Currently only works for bi-allelics (documented). * Added unit and integration tests.		2013-03-05 23:16:42 -05:00
licensing	Removing the symlink from the private license file	2013-02-09 12:57:44 -05:00
protected	Added new walker to split MNPs into their allelic primitives (SNPs).	2013-03-05 23:16:42 -05:00
public	Added new walker to split MNPs into their allelic primitives (SNPs).	2013-03-05 23:16:42 -05:00
settings	Haplotype/Allele based optimizations for the HaplotypeCaller that knock off nearly 20% of the total runtime (multi-sample).	2013-02-21 10:14:11 -05:00
.gitignore	Fixing the licensing scripts	2013-01-26 13:42:49 -05:00
build.xml	Ant target to package a GATK jar with private included	2013-03-01 15:33:59 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Brought all of ReduceReads to fastutils	2013-02-23 22:53:23 -05:00