hanna 8f75d88519 Fix for GATK run report ids: ... mOVsxGfDiiSMxVs2PPTVjzYTVbizlD6e f9kUHUADFsZ0LiTGxRL5zPmq9kZcA4cQ 8eGHWJFAlBVmgxwPi3sMd1RmiN2PwHOf iLhvHWveypKb2F8vKS5irHylc3pYvlOb HDttXKUMEVoPrvVeWrH7E0htxYyNydMx plus a bit of cleanup of custom exceptions in the sharding system. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4330 348d0f76-0448-11de-a6fe-93d51630548a		2010-09-22 19:49:25 +00:00
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providers	removal of most of the old GATK ROD system; also a fix for -Dsingle so we can again run just a single unit or integration test (single tests in tribble can be run with the -DsingleTest option now). More to come.	2010-09-15 22:54:49 +00:00
sample	Quickly adding a new convenience method for retreiving a group of samples. The method is getSamples(Collection<String>) and returns a set of sample objects. There's also a test there.	2010-09-17 15:55:17 +00:00
shards	Command-line argument tagging is in, and the ROD system is hacked slightly to support the new syntax	2010-08-25 03:47:57 +00:00
simpleDataSources	Fix for GATK run report ids:	2010-09-22 19:49:25 +00:00