Eric Banks ba2c3b57ed Extended the allele-biased down-sampling functionality to handle reduced reads. ... Note that this works only in the case of pileups (i.e. coming from UG); allele-biased down-sampling for RR just cannot work for haplotypes. Added lots of unit tests for new functionality.		2013-04-26 11:23:17 -04:00
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net/sf	Updated all JAVA file licenses accordingly	2013-01-10 17:06:41 -05:00
org/broadinstitute/sting	Extended the allele-biased down-sampling functionality to handle reduced reads.	2013-04-26 11:23:17 -04:00