gatk3的最后一个经典版本3.8

Mauricio Carneiro 76c32f5409 Revert "Compressed read group information" ... We decided not to compress read group information because read groups should be universally unique. The gain of 3% compression was not worth it. This reverts commit 79f1c3b70de240d8060ecb9a86d2f1d4ff2a8efb.		2011-11-01 16:33:21 -04:00
public	Minor fixes to docs	2011-10-31 21:41:43 -04:00
settings	Picard upgrade to 1.55.	2011-10-24 17:02:27 -04:00
.gitignore	Minor additions to the shared .gitignore file, now that Mark has checked one in.	2011-10-26 12:24:28 -04:00
LICENSE	One last test...	2011-06-28 19:18:17 -04:00
build.xml	No more hunting down R "resources". As a tradeoff Rscript cannot be specified on the commandline and will be found in the environment path.	2011-10-27 14:17:07 -04:00
ivy.xml	Fixed Ant / PluginManager issue where reflections was picking up all class files under current working directory due to "." in jar manifest classpaths.	2011-09-27 14:33:57 -04:00