gatk-3.8/java
delangel fa9c21c020 More fixes for exact AF calculation model in new unified genotyper:
a) Fixed bugs in new dynamic programming-based genotyper
b) Fixed up temp hack that handles extended pileups for now.



git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4398 348d0f76-0448-11de-a6fe-93d51630548a
2010-10-01 02:32:50 +00:00
..
config Provide a default logger, some config settings, and some doc updates. 2009-04-29 02:06:05 +00:00
src More fixes for exact AF calculation model in new unified genotyper: 2010-10-01 02:32:50 +00:00
test Basic unit tests for WalkerManager. 2010-09-30 19:27:41 +00:00