gatk3的最后一个经典版本3.8
 
 
 
 
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Mark DePristo 7605c6bcc4 Done GSA-515 Nanoscheduler / GSA-557 V3 nanoScheduler algorithm
-- V3 + V4 algorithm for NanoScheduler.  The newer version uses 1 dedicated input thread and n - 1 map/reduce threads.  These MapReduceJobs perform map and a greedy reduce.  The main thread's only job is to shuttle inputs from the input producer thread, enqueueing MapReduce jobs for each one.  We manage the number of map jobs now via a Semaphore instead of a BlockingQueue of fixed size.
-- This new algorithm should consume N00% CPU power for -nct N value.
-- Also a cleaner implementation in general
-- Vastly expanded unit tests
-- Deleted FutureValue and ReduceThread
2012-09-19 17:03:12 -04:00
licensing Revert unintentional license change 2012-08-09 17:10:47 -04:00
protected/java Merged bug fix from Stable into Unstable 2012-09-19 16:09:45 -04:00
public Done GSA-515 Nanoscheduler / GSA-557 V3 nanoScheduler algorithm 2012-09-19 17:03:12 -04:00
settings Updating cofoja to the latest version 2012-08-09 16:36:18 -04:00
.gitignore a few more useful git ignores 2012-09-01 11:08:36 -04:00
build.xml More memory for gatkdocs and extracthelp targets 2012-09-05 15:45:22 -04:00
ivy.xml Updating cofoja to the latest version 2012-08-09 16:36:18 -04:00