gatk3的最后一个经典版本3.8

Eric Banks 75ceddf9e5 Adding new unit tests for RR. These tests took a frustratingly long time to get to pass, but now we have a framework for ... testing the adding of reads into the SlidingWindow plus consensus creation. Will flesh these out more after I take care of some other items on my plate.		2013-01-31 09:46:38 -05:00
licensing	Refrain from pushing symlinks into the repo... not all filesystems treat it correctly	2013-01-22 15:18:19 -07:00
protected/java	Adding new unit tests for RR. These tests took a frustratingly long time to get to pass, but now we have a framework for	2013-01-31 09:46:38 -05:00
public	More aggressive checking of AWS key quality upon startup in the GATK	2013-01-31 09:08:38 -05:00
settings	Final r119 tribble jar	2012-11-02 14:30:33 -04:00
.gitignore	Fixing the licensing scripts	2013-01-26 13:42:49 -05:00
build.xml	Encrypt GATK AWS keys using the GATK private key, and decrypt as needed as a resource when uploading to AWS logs	2013-01-30 16:42:23 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	ReadBackedPileup cleanup	2013-01-11 15:17:18 -05:00