Khalid Shakir f809f24afb Removed SelectHeader's --include_reference_name option since the reference is always included. ... In SelectHeaders instead of including the path to the file, only include the name of the reference since dbGaP does not like paths in headers.		2012-08-13 16:49:27 -04:00
..
R	Fixed spelling error in BQSR.R	2012-08-13 10:01:33 -04:00
c	…
chainFiles	…
doc	…
java	Removed SelectHeader's --include_reference_name option since the reference is always included.	2012-08-13 16:49:27 -04:00
keys	Public-key authorization scheme to restrict use of NO_ET	2012-03-06 00:09:43 -05:00
packages	Removed 'Walker' suffix from packages/GATKEngine.xml that were breaking the packaged release.	2012-07-23 16:32:31 -04:00
perl	…
scala	Added setupRetry() to modify jobs when Queue is run with '-retry' and jobs are about to restart after an error.	2012-08-13 15:43:05 -04:00
testdata	Reverting move of BQSR tests to public, as per DR's email	2012-07-19 10:02:05 -04:00