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annotations
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More archiving
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2010-07-12 17:04:41 +00:00 |
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concordance
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Archiving
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2010-07-27 02:47:18 +00:00 |
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glf
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Moving GLF code to archive
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2011-01-15 22:42:42 +00:00 |
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graphalign
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archiving, removing, or promoting to core from playground
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2010-08-27 01:07:42 +00:00 |
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mendelian
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archiving, removing, or promoting to core from playground
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2010-08-27 01:07:42 +00:00 |
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multisamplecaller
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Retiring multi-sample genotyper
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2010-05-20 14:11:11 +00:00 |
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oldepthofcoverage
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CoverageStatistics has now replaced DepthOfCoverage -- old DoC is in the archive.
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2010-04-01 16:27:23 +00:00 |
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oldindels
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Removing deprecated version of indel genotyper (putting it in archive in case we need to reproduce original 1KG indel calls for some reason).
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2010-01-31 14:05:36 +00:00 |
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oldsecondarybases
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Removing deprecated code and walkers for which I had the green light from repository.
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2009-12-01 05:58:20 +00:00 |
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poolseq
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Cleaning up playground utils and tests
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2010-08-27 01:25:47 +00:00 |
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secondaryBases
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archiving, removing, or promoting to core from playground
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2010-08-27 01:07:42 +00:00 |
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vcftools
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1. Refactoring of GenoypeWriters so that parallelization now works again with VCF4.0. We now have just a single reference to the old VCF classes, and that one will be purged soon.
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2010-07-20 06:16:45 +00:00 |
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ACTransitionTable.java
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Removed unused importants, but some of these scripts are now out of date (they have been for a long time) so they don't compile anyway
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2011-05-22 18:43:48 +00:00 |
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AlleleBalanceInspector.java
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more clean-up: moving AlleleBalanceInspector to archive.
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2010-04-16 20:53:33 +00:00 |
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AlleleFrequencyComparison.java
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Removed unused importants, but some of these scripts are now out of date (they have been for a long time) so they don't compile anyway
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2011-05-22 18:43:48 +00:00 |
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AminoAcidTransition.java
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Removed unused importants, but some of these scripts are now out of date (they have been for a long time) so they don't compile anyway
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2011-05-22 18:43:48 +00:00 |
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BaseTransitionTableCalculatorJavaWalker.java
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Eric broke the build. Eric broke the build.
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2010-12-15 17:01:38 +00:00 |
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ConcordanceTruthTable.java
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No longer used
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2010-04-16 17:57:39 +00:00 |
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DSBWalker.java
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moving older versions of the oneoff project to archive, bye-bye
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2010-02-04 19:46:27 +00:00 |
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DSBWalkerV2.java
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moving older versions of the oneoff project to archive, bye-bye
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2010-02-04 19:46:27 +00:00 |
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DuplicateQualsWalker.java
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Home for retired duplicateQuals analysis utility
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2010-01-06 15:05:00 +00:00 |
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HapmapPoolAllelicInfoWalker.java
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No longer used
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2010-04-16 17:57:39 +00:00 |
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