gatk3的最后一个经典版本3.8

Mark DePristo 74e153ff4a FisherStrand now uses RankSumTest isUsableBase to decide if a read should be included in testing ... -- Previously used hardcoded MAPQ > 20 && QUAL > 20 but now uses isUsableBase -- Updating MD5s as appropriate		2012-07-18 16:07:47 -04:00
licensing	Finalizing GATK2 license text	2012-07-18 16:07:47 -04:00
protected/java	FisherStrand now uses RankSumTest isUsableBase to decide if a read should be included in testing	2012-07-18 16:07:47 -04:00
public	FisherStrand now uses RankSumTest isUsableBase to decide if a read should be included in testing	2012-07-18 16:07:47 -04:00
settings	Rev tribble to 110. Log is:	2012-06-26 15:28:32 -04:00
.gitignore	Minor additions to the shared .gitignore file, now that Mark has checked one in.	2011-10-26 12:24:28 -04:00
build.xml	Change committest target to allow inheritance of properties	2012-07-18 12:45:51 -04:00
ivy.xml	Navel -> GXDB	2012-06-28 13:38:00 -04:00