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Aligner.xml
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Cleanup and formatting overhaul.
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2010-01-21 19:22:56 +00:00 |
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AnalyzeConcordance.xml
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Added a playground concordance analyzer for summarizing VariantEval across a group.
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2010-02-22 20:28:52 +00:00 |
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AnalyzeCovariates.xml
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A few more bug fixes based on extended testing. Sorry, Eric.
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2010-01-21 22:12:16 +00:00 |
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CreatePackager.xsl
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Tweak the layout of the resulting .tar.bz2 a bit.
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2010-01-27 22:07:37 +00:00 |
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FindContaminatingReadGroups.xml
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Cleanup and formatting overhaul.
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2010-01-21 19:22:56 +00:00 |
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GATK-Picard.xml
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A few more bug fixes based on extended testing. Sorry, Eric.
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2010-01-21 22:12:16 +00:00 |
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GATKResources.xml
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Cleanup and formatting overhaul.
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2010-01-21 19:22:56 +00:00 |
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GenomeAnalysisTK.xml
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changed the depth of coverage walkers class name, and added a dependency in the packaging system so that RODs will all get imported.
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2010-04-02 20:55:19 +00:00 |
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IndelGenotyper.xml
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Bringing IndelGenotyper back to life
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2010-02-03 20:12:49 +00:00 |
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LiftoverVCF.xml
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First pass at liftover tool. Passing buck over to Aaron...
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2010-05-05 20:38:19 +00:00 |
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LocalRealignmentAroundIndels.xml
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Since IntervalCleaner is gone for good, it is sensible to update the package to refer to the new IndelRealigner instead
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2010-02-24 16:42:56 +00:00 |
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PicardPrivate.xml
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Fix for Kiran's sharding issue (Invalid GZIP header). General cleanup of
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2010-03-29 03:21:27 +00:00 |
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QualityScoresRecalibration.xml
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A few more bug fixes based on extended testing. Sorry, Eric.
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2010-01-21 22:12:16 +00:00 |
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UnifiedGenotyper.xml
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Cleanup and formatting overhaul.
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2010-01-21 19:22:56 +00:00 |
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VariantAnnotator.xml
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Adding HaplotypeScore to the VariantAnnotator package (so it can be used with Firehose)
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2010-04-14 18:37:21 +00:00 |
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VariantEval.xml
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Renaming for consistency
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2010-04-21 03:00:43 +00:00 |
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VariantFiltration.xml
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Temporary solution: add the commons logging implementation to the VariantFiltration package. Downstream solution is described in GSA-262.
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2010-01-23 01:46:18 +00:00 |
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