ebanks 1a99fb9318 First pass at liftover tool. Passing buck over to Aaron... ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3306 348d0f76-0448-11de-a6fe-93d51630548a		2010-05-05 20:38:19 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src/org/broadinstitute/sting	First pass at liftover tool. Passing buck over to Aaron...	2010-05-05 20:38:19 +00:00
test/org/broadinstitute/sting	speed-up for VCF, adding code to the VCF reader to automagically make an index if one doesn't already exist, and a change to the VCF writer unit test	2010-05-05 20:19:42 +00:00