gatk3的最后一个经典版本3.8

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Mauricio Carneiro 74639463b9 Updating excessive coverage default parameter most people don't care about excessive coverage (unless you're very particular about your analysis). Therefore the best possible default value for this is Integer.maxValue so it doesn't get in the way. Itemized Changes: * change maximumCoverage threshold to Integer.maxValue [delivers #57353620]		2013-09-19 23:07:20 -04:00
licensing	deleted old license files	2013-07-02 16:36:47 -04:00
protected	Updating excessive coverage default parameter	2013-09-19 23:07:20 -04:00
public	adding a check for the UNAVAILABLE case of GenotypeType in CountVariants	2013-08-29 17:27:00 -04:00
settings	- update picard, sam, variants and tribble after fixing bug in BCF2Utils.makeDictionary as reported in ticket 52571227	2013-08-21 12:06:42 -04:00
.gitignore	Detect stuck lock-acquisition calls, and disable file locking for tests	2013-04-24 22:49:02 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
build.xml	build.xml: make ant -p output only important build targets	2013-07-19 14:35:00 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Brought all of ReduceReads to fastutils	2013-02-23 22:53:23 -05:00

The Genome Analysis Toolkit