ebanks b59d62927e Fix busted performance test (-outputBam has been deprecated in the BQ recalibrator in favor of -o) ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4201 348d0f76-0448-11de-a6fe-93d51630548a		2010-09-03 12:51:53 +00:00
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alignment	Disabled AlignerIntegrationTest while addressing build machine memory issues.	2010-08-14 01:23:21 +00:00
commandline	The copyright tag that I copied/pasted from a LaTeX document into IntelliJ had	2010-04-20 15:26:32 +00:00
gatk	Fix busted performance test (-outputBam has been deprecated in the BQ recalibrator in favor of -o)	2010-09-03 12:51:53 +00:00
oneoffprojects/walkers	Update integration tests to use the new ROD syntax.	2010-08-25 18:13:30 +00:00
playground	The battle is over. Picard is revved.	2010-09-03 05:28:01 +00:00
utils	Replaced placeholder support for splitting by read group with read support (sorry everyone), and added relatively comprehensive unit tests to ensure that splitting by read group works.	2010-09-01 22:24:50 +00:00
BaseTest.java	Moving pointer to b36 reference from /broad/1KG to /humgen/1kg	2010-08-13 00:54:34 +00:00
WalkerTest.java	Oops, don't enable reporting in integration tests	2010-08-31 22:56:18 +00:00