gatk-3.8/java
kiran 73acfa654a Fixed double-counting bug. Fixed issue where evaluation module with an update2() method wasn't getting called if the comp track was null. Added a column to the output report indicating the table name for easy greppability. Fixed an issue where, if sample-level stratification was not required, the sample-level VCs would be generated anyway.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5000 348d0f76-0448-11de-a6fe-93d51630548a
2011-01-14 14:06:43 +00:00
..
config Provide a default logger, some config settings, and some doc updates. 2009-04-29 02:06:05 +00:00
src Fixed double-counting bug. Fixed issue where evaluation module with an update2() method wasn't getting called if the comp track was null. Added a column to the output report indicating the table name for easy greppability. Fixed an issue where, if sample-level stratification was not required, the sample-level VCs would be generated anyway. 2011-01-14 14:06:43 +00:00
test Longer wait time for threading test (5 min now) and an assertion to ensure that all jobs finished. Should probably just remove the longer running test so this becoming a non-issue 2011-01-14 13:09:31 +00:00