Valentin Ruano-Rubio 736a857e82 Fixing CombineGVCFs that writes out the wrong REF allele ... Story: ===== - https://www.pivotaltracker.com/story/show/83259038 Changes: ======= - Done minimal changes to make the fix after an arduous attempt to understand CombineGVCFs code. Test: ==== - Added a integration test to explicitly test for the bug. - Updated a md5 changes as the bug was actually affecting one of the existing integration tests.		2014-12-13 22:38:24 -05:00
..
gatk-package-distribution	Added faster built executable, non-packaged jars.	2014-11-05 00:30:46 +08:00
gatk-queue-extensions-distribution	Disabling tests for Lsf706 specific functionality.	2014-11-04 01:31:18 +08:00
gatk-queue-package-distribution	Added faster built executable, non-packaged jars.	2014-11-05 00:30:46 +08:00
gatk-tools-protected	Fixing CombineGVCFs that writes out the wrong REF allele	2014-12-13 22:38:24 -05:00
pom.xml	Update pom versions to mark the start of GATK 3.4 development	2014-10-23 22:31:44 -04:00