gatk3的最后一个经典版本3.8

Mark DePristo 734bb5366b Special case the situation where we have ploidy == 0 (no GT values) to implicitly assume we have diploid samples ... -- numLikelihoods no longer allows even ploidy == 0 in requires -- VCFCompoundHeaderLine handles the case where ploidy == 0 => implicit ploidy == 2		2012-06-28 10:06:07 -04:00
licensing	Remove old licensing	2012-04-25 12:23:08 -04:00
protected/java	Moving ReduceReads into protected	2012-06-25 17:01:33 -04:00
public	Special case the situation where we have ploidy == 0 (no GT values) to implicitly assume we have diploid samples	2012-06-28 10:06:07 -04:00
settings	Rev tribble to 110. Log is:	2012-06-26 15:28:32 -04:00
.gitignore	Minor additions to the shared .gitignore file, now that Mark has checked one in.	2011-10-26 12:24:28 -04:00
build.xml	ant fasttest: for when you just can't wait	2012-06-01 15:17:18 -04:00
ivy.xml	JEXL update	2012-06-21 15:17:21 -04:00