David Roazen 65d31ba4ad Fix runtime public -> protected dependencies in the test suite ... -replace unnecessary uses of the UnifiedGenotyper by public integration tests with PrintReads -move NanoSchedulerIntegrationTest to protected, since it's completely dependent on the UnifiedGenotyper		2013-02-26 21:19:12 -05:00
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CNV	Updated all JAVA file licenses accordingly	2013-01-10 17:06:41 -05:00
coverage	Updated all JAVA file licenses accordingly	2013-01-10 17:06:41 -05:00
qc	Fix runtime public -> protected dependencies in the test suite	2013-02-26 21:19:12 -05:00
readutils	PrintReads writes a header when used with -BQSR	2013-02-14 22:19:14 -05:00
BAQIntegrationTest.java	Update MD5s to reflect version number change in the BAM header	2013-02-01 13:51:31 -05:00