Mark DePristo 72b2e77eed Linearize the findEndOfRegion algorithm in ActivityProfile, radically improving its performance ... -- Previous algorithm was O(N^2) -- #resolve GSA-723 https://jira.broadinstitute.org/browse/GSA-723		2013-01-27 14:10:06 -05:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Linearize the findEndOfRegion algorithm in ActivityProfile, radically improving its performance	2013-01-27 14:10:06 -05:00
test	Making SplitReads output FastQ's instead of BAM	2013-01-27 02:36:31 -05:00