chartl 5815348ebc Switch to newer version of comp tracks (and make the trigger track a comp as well). Indel cleaning should override the interval list and only use the contig interval list; and also force jobs to go to long. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3941 348d0f76-0448-11de-a6fe-93d51630548a		2010-08-04 20:05:27 +00:00
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depristo	1KG Table 1 counting pipeline. Useful example	2010-07-17 22:30:56 +00:00
rpoplin	Checking in a simplistic VR qscript file for posterity's sake	2010-07-01 18:53:17 +00:00
fullCallingPipeline.q	Switch to newer version of comp tracks (and make the trigger track a comp as well). Indel cleaning should override the interval list and only use the contig interval list; and also force jobs to go to long.	2010-08-04 20:05:27 +00:00
recalibrate.scala	Better DOT support and updated recalibration pipeline	2010-07-16 20:54:51 +00:00
unifiedgenotyper_example.properties	Added a temporary gatkLoggingLevel field to the soon to be obsolete GatkFunction while finishing up the delayed generic gatk walker utility.	2010-07-11 03:27:32 +00:00
unifiedgenotyper_example.scala	Fixed typo in the name of the shell directory.	2010-06-25 20:59:40 +00:00