gatk-3.8/scala/qscript
depristo 72ad8ded19 Removed unused importants, but some of these scripts are now out of date (they have been for a long time) so they don't compile anyway
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5837 348d0f76-0448-11de-a6fe-93d51630548a
2011-05-22 18:43:48 +00:00
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core wex is wex, wgs is wgs.... i think i got it right this time. 2011-05-20 16:44:25 +00:00
examples When /etc/mailname is unreadable fall back to the hostname. 2011-04-11 20:22:44 +00:00
lib Thanks to mark: VCFInfoToTable removed in favor of a more flexible walker. Slight change to the argument structure of the walker to make it play more nicely with Queue: the field list parsing is pushed into the command line system (e.g. the variable is exposed as a List<String> and not a String, so Queue doesn't have to join a list into a string only to have it broken out again. This also allows the user to specify -F field1 -F field2 -F field3 if he/she so desires. 2010-12-15 03:33:36 +00:00
oneoffs Removed unused importants, but some of these scripts are now out of date (they have been for a long time) so they don't compile anyway 2011-05-22 18:43:48 +00:00
playground Renamed FCP to HybridSelectionPipeline. 2011-05-19 22:47:02 +00:00