chartl 80770dc032 Expanded target pipeline complete. Stop trying to be clever about scatter-gather; wait until functional SG is built-in to Q. Til then, a lazy version of the fullCallingPipeline. Seems to take a long time to generate the graph though... ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4888 348d0f76-0448-11de-a6fe-93d51630548a		2010-12-21 00:56:16 +00:00
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old	Restructuring my qscripts	2010-12-11 20:58:45 +00:00
RefineGenotypesAndMerge.q	Commit for Ryan	2010-10-05 19:04:10 +00:00
batchMergePipeline.q	Now that addAll() is in the superclass, no longer need this definition (which, without override, prevents the script from compiling anyway)	2010-12-17 05:36:31 +00:00
expanded_targets.q	Expanded target pipeline complete. Stop trying to be clever about scatter-gather; wait until functional SG is built-in to Q. Til then, a lazy version of the fullCallingPipeline. Seems to take a long time to generate the graph though...	2010-12-21 00:56:16 +00:00
fullCallingPipelineV2.q	java changes:	2010-12-12 05:10:45 +00:00
omni_qc.q	Bug fix to GenotypeConcordance. AC metrics get instantiated based on number of eval samples; if Comp has more samples, we can see AC indeces outside the bounds of the array.	2010-11-03 19:23:03 +00:00
private_mutations.q	Commit for Khalid -- should be a scala version of vcf2table but for some reason the run method isn't getting called.	2010-12-15 00:44:15 +00:00