gatk3的最后一个经典版本3.8

Eric Banks 70479cb71d RR bug fix: we were failing when a read started with an insertion just at the edge of the consensus region. ... The weird part is that the comments claimed it was doing what it was supposed to, but it didn't actually do it. Now we maintain the last header element of the consensus (but without bases and quals) if it adjoins an element with an insertion. Added the user's test file as an integration test.		2012-12-19 10:59:07 -05:00
licensing	Final final final version of the license.	2012-07-20 18:00:02 -04:00
protected/java	RR bug fix: we were failing when a read started with an insertion just at the edge of the consensus region.	2012-12-19 10:59:07 -05:00
public	Move VCF/BCF2/VariantContext to new standalone org.broadinstitute.variant package	2012-12-19 10:25:22 -05:00
settings	Final r119 tribble jar	2012-11-02 14:30:33 -04:00
.gitignore	adding some directories to gitignore	2012-09-27 11:09:41 -04:00
build.xml	Move VCF/BCF2/VariantContext to new standalone org.broadinstitute.variant package	2012-12-19 10:25:22 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Use build jars in test classpaths by default	2012-11-28 22:57:04 -05:00