Chris Hartl 06d28c7f8b VariantsToBinaryPed: Move .fam file writing to initialize to ensure ordering matches the ordering of the VCF. Change the documentation to clarify that the fam files are not directly copied, but subset and re-ordered.		2013-10-10 12:53:15 -04:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	VariantsToBinaryPed: Move .fam file writing to initialize to ensure ordering matches the ordering of the VCF. Change the documentation to clarify that the fam files are not directly copied, but subset and re-ordered.	2013-10-10 12:53:15 -04:00
test	Remove org.apache.commons.collections.IteratorUtils dependency from the test suite	2013-08-21 19:44:02 -04:00