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gatk-3.8/public/java/test/org/broadinstitute/sting/gatk
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Mark DePristo 6f26c07b85 Removed the SpecificDifference class. Now Difference classes always have the option to remember specific master and test values. This means that all summarized differences carry with them specific examples of their differences. Consequently, now even summarized differences give at least one example of the specific difference, even when the count of the difference is > 1. Unit tests updated. Added DiffObjects integrationtest. VCFDiffableReader now specifically reads the first line of the VCF file to capture the version number. 2011-07-18 10:42:35 -04:00
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arguments Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
datasources Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
executive Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
filters Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
iterators Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
refdata Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
report Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
traversals Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
walkers Removed the SpecificDifference class. Now Difference classes always have the option to remember specific master and test values. This means that all summarized differences carry with them specific examples of their differences. Consequently, now even summarized differences give at least one example of the specific difference, even when the count of the difference is > 1. Unit tests updated. Added DiffObjects integrationtest. VCFDiffableReader now specifically reads the first line of the VCF file to capture the version number. 2011-07-18 10:42:35 -04:00
GenomeAnalysisEngineUnitTest.java Fixing broken paths to the testdata directory throughout the codebase. 2011-06-29 17:36:47 -04:00
WalkerManagerUnitTest.java Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00