ebanks 6f11fe442a Sync with Andrey's changes ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2723 348d0f76-0448-11de-a6fe-93d51630548a		2010-01-28 20:49:38 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src	Sync with Andrey's changes	2010-01-28 20:49:38 +00:00
test/org/broadinstitute/sting	V5 improvements to VariantContext. Now fully supports genotypes. Filtering enabled. Significant tests throughout system. Support for rebuilding variant contexts from subsets of genotypes. Some code cleanup around repository	2010-01-28 18:37:17 +00:00