gatk-3.8/protected
Valentin Ruano-Rubio c167fb5fdf Fixing GenotypesGVCF.
Bug uncovered by some untrimmed alleles in the single sample pipeline output.

Notice however does not fix the untrimmed alleles in general.

Story:

https://www.pivotaltracker.com/story/show/65481104

Changes:

1. Fixed the bug itself.
2. Fixed non-working tests (sliently skipped due to exception in dataProvider).
2014-02-19 14:20:39 -05:00
..
gatk-protected Fixing GenotypesGVCF. 2014-02-19 14:20:39 -05:00
scala/test/org/broadinstitute/sting/queue/pipeline/examples Fix improper dependencies in QScripts used by pipeline tests, and attempt to fix the flawed MisencodedBaseQualityUnitTest 2013-02-27 04:45:53 -05:00
pom.xml Bumped version to 2.8-SNAPSHOT, using new update_pom_versions.sh script. 2014-02-03 13:50:46 -05:00