Eric Banks 6df43f730a Fixing ReadBackedPileup to represent mapping qualities as ints, not (signed) bytes. ... Having them as bytes caused problems for downstream programmers who had data with high MQs.		2013-07-23 23:47:15 -04:00
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java	Fixing ReadBackedPileup to represent mapping qualities as ints, not (signed) bytes.	2013-07-23 23:47:15 -04:00
scala/test/org/broadinstitute/sting/queue/pipeline/examples	Fix improper dependencies in QScripts used by pipeline tests, and attempt to fix the flawed MisencodedBaseQualityUnitTest	2013-02-27 04:45:53 -05:00