Eric Banks 165b936fcd Fixing the 'header is negative' problem in Reduce Reads... again. ... Previous fixes and tests only covered trailing soft-clips. Now that up front hard-clipping is working properly though, we were failing on those in the tool. Added a patch for this as well as a separate test independent of the soft-clips to make sure that it's working properly.		2013-06-24 14:06:21 -04:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Fixing the 'header is negative' problem in Reduce Reads... again.	2013-06-24 14:06:21 -04:00
test	Better GATK version and command line output	2013-06-20 11:19:13 -04:00