gatk-3.8/public/VectorPairHMM/src/main/c++/template.h

120 lines
3.0 KiB
C

/*Copyright (c) 2012 The Broad Institute
*Permission is hereby granted, free of charge, to any person
*obtaining a copy of this software and associated documentation
*files (the "Software"), to deal in the Software without
*restriction, including without limitation the rights to use,
*copy, modify, merge, publish, distribute, sublicense, and/or sell
*copies of the Software, and to permit persons to whom the
*Software is furnished to do so, subject to the following
*conditions:
*The above copyright notice and this permission notice shall be
*included in all copies or substantial portions of the Software.
*THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
*EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES
*OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
*NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT
*HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
*WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
*FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR
*THE USE OR OTHER DEALINGS IN THE SOFTWARE.
*/
#ifndef TEMPLATES_H_
#define TEMPLATES_H_
#include "headers.h"
#define ALIGNED __attribute__((aligned(32)))
#ifdef SIMD_ENGINE_AVX
typedef union __attribute__((aligned(32))) {
ALIGNED __m256 ALIGNED d;
ALIGNED __m128i ALIGNED s[2];
ALIGNED float ALIGNED f[8];
ALIGNED __m256i ALIGNED i;
} ALIGNED mix_F ALIGNED;
#endif
typedef union __attribute__((aligned(32))) {
ALIGNED __m128 ALIGNED d;
ALIGNED __m64 ALIGNED s[2];
ALIGNED float ALIGNED f[4];
ALIGNED __m128i ALIGNED i;
} ALIGNED mix_F128 ALIGNED;
typedef union ALIGNED {
__m128i vec ;
__m128 vecf ;
uint32_t masks[4] ;
} MaskVec_F ;
typedef union ALIGNED {
__m64 vec ;
__m64 vecf ;
uint32_t masks[2] ;
} MaskVec_F128 ;
typedef union ALIGNED
{
ALIGNED __m128i ALIGNED i;
ALIGNED __m128 ALIGNED f;
} ALIGNED IF_128f ALIGNED;
typedef union ALIGNED
{
ALIGNED int ALIGNED i;
ALIGNED float ALIGNED f;
} ALIGNED IF_32 ALIGNED;
#ifdef SIMD_ENGINE_AVX
typedef union __attribute__((aligned(32))) {
ALIGNED __m256d ALIGNED d;
ALIGNED __m128i ALIGNED s[2];
ALIGNED double ALIGNED f[4];
ALIGNED __m256i ALIGNED i;
} ALIGNED mix_D ALIGNED;
#endif
typedef union __attribute__((aligned(32))) {
ALIGNED __m128d ALIGNED d;
ALIGNED __m64 ALIGNED s[2];
ALIGNED double ALIGNED f[2];
ALIGNED __m128i ALIGNED i;
} ALIGNED mix_D128 ALIGNED;
typedef union ALIGNED {
__m128i vec ;
__m128d vecf ;
uint64_t masks[2] ;
} MaskVec_D ;
typedef union ALIGNED {
__m64 vec ;
__m64 vecf ;
uint64_t masks[1] ;
} MaskVec_D128 ;
typedef union ALIGNED
{
ALIGNED __m128i ALIGNED i;
ALIGNED __m128d ALIGNED f;
} ALIGNED IF_128d ALIGNED;
typedef union ALIGNED
{
ALIGNED int64_t ALIGNED i;
ALIGNED double ALIGNED f;
} ALIGNED IF_64 ALIGNED;
#include "common_data_structure.h"
#endif