Khalid Shakir 6d6149b9a2 Updated gsalib gsa.read.gatkreport to return all reports, even those beginning with '.'. ... In PreQC using geom_blank() so MEDIAN_INSERT_SIZE plot doesn't crash on facet_grid(scales='free') when data doesn't contain points for 'RF' or 'TANDEM'.		2011-10-05 18:30:40 -04:00
..
R	Updated gsalib gsa.read.gatkreport to return all reports, even those beginning with '.'.	2011-10-05 18:30:40 -04:00
c	Reinitialize random seed in the bwa bindings from the fixed seed stored in the	2011-07-22 13:41:53 -04:00
chainFiles	…
doc	…
java	Final PED documentation	2011-10-05 15:17:41 -07:00
packages	Fixed Ant / PluginManager issue where reflections was picking up all class files under current working directory due to "." in jar manifest classpaths.	2011-09-27 14:33:57 -04:00
perl	Update to the bindings for liftOverVCF.pl (to -V from -B)	2011-09-15 15:33:09 -04:00
scala	Merged bug fix from Stable into Unstable	2011-09-27 14:34:39 -04:00
testdata	Adding bgzip vcf file for unit tests	2011-09-21 15:39:45 -04:00