| .. |
|
.gitignore
|
Moved vector JNI code to public/c++/VectorPairHMM
|
2014-01-27 14:52:59 -08:00 |
|
JNI_README
|
Moved vector JNI code to public/c++/VectorPairHMM
|
2014-01-27 14:52:59 -08:00 |
|
LoadTimeInitializer.cc
|
Includes code for all debug code for obtaining profiling info
|
2014-01-30 12:08:06 -08:00 |
|
LoadTimeInitializer.h
|
Includes code for all debug code for obtaining profiling info
|
2014-01-30 12:08:06 -08:00 |
|
Makefile
|
Includes code for all debug code for obtaining profiling info
|
2014-01-30 12:08:06 -08:00 |
|
avx_function_instantiations.cc
|
Moved vector JNI code to public/c++/VectorPairHMM
|
2014-01-27 14:52:59 -08:00 |
|
baseline.cc
|
Moved vector JNI code to public/c++/VectorPairHMM
|
2014-01-27 14:52:59 -08:00 |
|
define-double.h
|
Moved vector JNI code to public/c++/VectorPairHMM
|
2014-01-27 14:52:59 -08:00 |
|
define-float.h
|
Moved vector JNI code to public/c++/VectorPairHMM
|
2014-01-27 14:52:59 -08:00 |
|
define-sse-double.h
|
Moved vector JNI code to public/c++/VectorPairHMM
|
2014-01-27 14:52:59 -08:00 |
|
define-sse-float.h
|
Moved vector JNI code to public/c++/VectorPairHMM
|
2014-01-27 14:52:59 -08:00 |
|
headers.h
|
Moved vector JNI code to public/c++/VectorPairHMM
|
2014-01-27 14:52:59 -08:00 |
|
jni_common.h
|
Temporary commit containing debug profiling code - commented out
|
2014-01-29 12:10:29 -08:00 |
|
jnidebug.h
|
Moved vector JNI code to public/c++/VectorPairHMM
|
2014-01-27 14:52:59 -08:00 |
|
org_broadinstitute_sting_utils_pairhmm_DebugJNILoglessPairHMM.cc
|
Moved vector JNI code to public/c++/VectorPairHMM
|
2014-01-27 14:52:59 -08:00 |
|
org_broadinstitute_sting_utils_pairhmm_DebugJNILoglessPairHMM.h
|
Moved vector JNI code to public/c++/VectorPairHMM
|
2014-01-27 14:52:59 -08:00 |
|
org_broadinstitute_sting_utils_pairhmm_VectorLoglessPairHMM.cc
|
Includes code for all debug code for obtaining profiling info
|
2014-01-30 12:08:06 -08:00 |
|
org_broadinstitute_sting_utils_pairhmm_VectorLoglessPairHMM.h
|
Moved vector JNI code to public/c++/VectorPairHMM
|
2014-01-27 14:52:59 -08:00 |
|
pairhmm-1-base.cc
|
Includes code for all debug code for obtaining profiling info
|
2014-01-30 12:08:06 -08:00 |
|
pairhmm-template-kernel.cc
|
Moved vector JNI code to public/c++/VectorPairHMM
|
2014-01-27 14:52:59 -08:00 |
|
pairhmm-template-main.cc
|
Moved vector JNI code to public/c++/VectorPairHMM
|
2014-01-27 14:52:59 -08:00 |
|
run.sh
|
Modified run.sh
|
2014-01-27 14:56:46 -08:00 |
|
shift_template.c
|
Moved vector JNI code to public/c++/VectorPairHMM
|
2014-01-27 14:52:59 -08:00 |
|
sse_function_instantiations.cc
|
Moved vector JNI code to public/c++/VectorPairHMM
|
2014-01-27 14:52:59 -08:00 |
|
template.h
|
Moved vector JNI code to public/c++/VectorPairHMM
|
2014-01-27 14:52:59 -08:00 |
|
utils.cc
|
Includes code for all debug code for obtaining profiling info
|
2014-01-30 12:08:06 -08:00 |
|
utils.h
|
Includes code for all debug code for obtaining profiling info
|
2014-01-30 12:08:06 -08:00 |
|
vector_defs.h
|
Moved vector JNI code to public/c++/VectorPairHMM
|
2014-01-27 14:52:59 -08:00 |
|
vector_function_prototypes.h
|
Moved vector JNI code to public/c++/VectorPairHMM
|
2014-01-27 14:52:59 -08:00 |
6d4d776633