gatk3的最后一个经典版本3.8

Yossi Farjoun 6d12e5a54f Fixed md5s for the per-sample downsampling IntegrationTests that were disabled. ... - got md5s from a interim version that does not have the per-sample downsampling hookedup - added an integration test that forces the result from flat-downsampling to equal that which results from an equivalent flat contamination file		2013-02-13 12:49:39 -05:00
licensing	Removing the symlink from the private license file	2013-02-09 12:57:44 -05:00
protected/java	Fixed md5s for the per-sample downsampling IntegrationTests that were disabled.	2013-02-13 12:49:39 -05:00
public	Reorganized walker categories in GATKDocs (@DocumentedGATKFeature details)	2013-02-12 13:36:15 -05:00
settings	Replace org.broadinstitute.variant with jar built from the Picard repo	2013-02-05 17:24:25 -05:00
.gitignore	Fixing the licensing scripts	2013-01-26 13:42:49 -05:00
build.xml	Minor build.xml cleanup post-variant-migration	2013-02-06 11:16:52 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Replace org.broadinstitute.variant with jar built from the Picard repo	2013-02-05 17:24:25 -05:00