24 lines
951 B
XML
24 lines
951 B
XML
<?xml version="1.0" encoding="UTF-8"?>
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<!-- NOTE: Uses playground.
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ant clean playground package -Dexecutable=GATK-GSA-Pipeline -->
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<package name="GATK-GSA-Pipeline">
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<version file="StingText.properties" property="org.broadinstitute.sting.gatk.version" />
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<executable name="GATK-GSA-Pipeline">
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<main-class name="org.broadinstitute.sting.gatk.CommandLineGATK" />
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<resource-bundle file="StingText.properties" />
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<modules>
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<module file="QualityScoresRecalibration.xml" />
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<module file="LocalRealignmentAroundIndels.xml" />
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<module file="UnifiedGenotyper.xml" />
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<module file="VariantFiltration.xml" />
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<module file="VariantAnnotator.xml" />
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<module file="VariantEval.xml" />
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<module file="FindContaminatingReadGroups.xml" />
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</modules>
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<dependencies>
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<!-- Filters -->
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<package name="org.broadinstitute.sting.gatk.filters" />
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</dependencies>
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</executable>
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</package>
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