gatk-3.8/java/test/org/broadinstitute/sting/gatk
chartl d6b9b788a8 Renamed -- PlinkRodWithGenomeLoc --> PlinkRod
Since binary files do not need encoded locus information in the SNP names there's no need to suggest that it is so in the name of the rod



git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2671 348d0f76-0448-11de-a6fe-93d51630548a
2010-01-23 18:19:28 +00:00
..
arguments Looks bigger than it is: 2010-01-15 00:14:35 +00:00
datasources First successful test of new sharding system prototype. Can traverse over reads from a single 2010-01-15 03:35:55 +00:00
executive Added IterableLocusContextQueue and test. Cleaned up tests, adding BaseTest where it didn't exist. Enhanced test runner to run only classes ending in ...Test.java, so that utility classes can sit alongside the tests but won't be run by JUnit. 2009-05-13 21:32:05 +00:00
io Fix for problem where err stream remapped to output stream in certain cases, (hopefully) completing Matt's hat trick of fail. Thanks, unit tests. 2009-09-16 08:33:56 +00:00
iterators ant clean is your friend....fixed test code dependent on an interface change. 2010-01-22 20:07:46 +00:00
refdata Renamed -- PlinkRodWithGenomeLoc --> PlinkRod 2010-01-23 18:19:28 +00:00
traversals First successful test of new sharding system prototype. Can traverse over reads from a single 2010-01-15 03:35:55 +00:00
walkers - Fixed output for beagle header 2010-01-21 21:25:56 +00:00