asivache 6cf413e630 Bug: ExpandedSAMRecord did not treat hard-clipped bases ('H') correctly. Fixed. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2680 348d0f76-0448-11de-a6fe-93d51630548a		2010-01-25 19:23:44 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src	Bug: ExpandedSAMRecord did not treat hard-clipped bases ('H') correctly. Fixed.	2010-01-25 19:23:44 +00:00
test/org/broadinstitute/sting	Renamed -- PlinkRodWithGenomeLoc --> PlinkRod	2010-01-23 18:19:28 +00:00