ebanks 6c338eccb8 Joint Estimation model now emits calls in all formats. ... The whole GenotypeCall framework needs to be changed, but this will work for the time being. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1902 348d0f76-0448-11de-a6fe-93d51630548a		2009-10-23 03:07:28 +00:00
..
alignment	Read uints directly into longs.	2009-10-15 16:15:11 +00:00
gatk	Joint Estimation model now emits calls in all formats.	2009-10-23 03:07:28 +00:00
playground	BTTC is now Tree Reducible allowing for parallelization.	2009-10-22 23:19:29 +00:00
secondarybase	Rev'ing Picard, which includes the update to get all the reads in the query region (GSA-173). With it come a bunch of fixes, including retiring the FourBaseRecaller code, and updated md5 for some walker tests.	2009-09-30 20:37:59 +00:00
utils	Validates intervals against sequence dictionary header bounds.	2009-10-22 19:31:15 +00:00